RUNNING AP3D 1 PLAN files ========================================================================= 1/1 Processing Plan file /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/exposures/apogee-s/59907/logs/as3DPlan-43450003.yaml ========================================================================= Plan file information: apogee_drp_ver = daily telescope = lco25m instrument = apogee-s plateid = 0 fps = False force = False fpi = 0 mjd = 59907 planfile = as3DPlan-43450003.yaml apred_vers = daily platetype = single detid = 22810006 bpmid = 22620001 littrowid = 0 persistid = 0 persistmodelid = 0 darkid = 22620001 flatid = 22660002 testing detector file: /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/detector/asDetector-c-22810006.fits Detector file: /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/detector/asDetector-c-22810006.fits already made makecal dark: 22620001 dark file: /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/darkcorr/asDark-22620001.tab already made makecal flat: 22660002 flat file: /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/flatcorr/asFlat-22660002.tab already made makecal bpm: 22620001 bpm file: /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/bpm/asBPM-c-22620001.fits already made ------------------------------------------------------ 1/1 Processing files for Frame Number >>43450003<< ------------------------------------------------------ This is an OBJECT frame ----------------------------------------- Processing chip a - asR-a-43450003.apz ----------------------------------------- AP3DPROC Input Parameters: Saturation = 65000 Fixing Cosmic Rays Fixing Saturated Pixels Using UP-THE-RAMP Sampling Iterative CR detection OFF Output will be in ADU 1 File(s) input 1/1 Filename = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-a-43450003.apz ---------------------------------- /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-a-43450003.apz is a COMPRESSED file Decompressing with APUNZIP no_checksum: 0 Uncompressing >> /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-a-43450003.apz << (70.54 MB) Step I: Uncompress with funpack Nreads = 20 Step II: Reconstructing the original reads checking checksum 0 checking checksum 1 checking checksum 2 checking checksum 3 checking checksum 4 checking checksum 5 checking checksum 6 checking checksum 7 checking checksum 8 checking checksum 9 checking checksum 10 checking checksum 11 checking checksum 12 checking checksum 13 checking checksum 14 checking checksum 15 checking checksum 16 checking checksum 17 checking checksum 18 checking checksum 19 checking checksum 20 dt = 23.686871 sec Removing recently decompressed FITS file at end of processing Data file description: Datacube size = 2560 x 2048 x 20 Nreads = 20 Chip = a DET file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/detector/asDetector-a-22810006.fits BPM file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/bpm/asBPM-a-22620001.fits Dark Correction file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/darkcorr/asDark-a-22620001.fits Flat Field Correction file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/flatcorr/asFlat-a-22660002.fits Checking for bad reads in aprefcorr, indiv: 3 Calculating mean reference reading ref: 0 1 Rejecting: 0 28345.519 2.4110190 28362 reading ref: 1 2 reading ref: 2 3 reading ref: 3 4 reading ref: 4 5 reading ref: 5 6 reading ref: 6 7 reading ref: 7 8 reading ref: 8 9 reading ref: 9 10 reading ref: 10 11 reading ref: 11 12 reading ref: 12 13 reading ref: 13 14 reading ref: 14 15 reading ref: 15 16 reading ref: 16 17 reading ref: 17 18 reading ref: 18 19 reading ref: 19 20 Reference processing Ref processing: 1 nsat: 1 Ref processing: 2 nsat: 1 Ref processing: 3 nsat: 1 Ref processing: 4 nsat: 1 Ref processing: 5 nsat: 1 Ref processing: 6 nsat: 1 Ref processing: 7 nsat: 1 Ref processing: 8 nsat: 1 Ref processing: 9 nsat: 1 Ref processing: 10 nsat: 1 Ref processing: 11 nsat: 1 Ref processing: 12 nsat: 1 Ref processing: 13 nsat: 1 Ref processing: 14 nsat: 1 Ref processing: 15 nsat: 1 Ref processing: 16 nsat: 1 Ref processing: 17 nsat: 1 Ref processing: 18 nsat: 1 Ref processing: 19 nsat: 1 Ref processing: 20 nsat: 1 lastgood: 19 Read(s) 1 are bad. Processing the datacube 500/2048 1000/2048 1500/2048 2000/2048 subtracting reference array... Writing output to: /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/exposures/apogee-s/59907/as2D-a-43450003.fits Deleting recently decompressed file /scratch/general/nfs1/mwm//asR-a-43450003.fits BAD/CR/Saturated Pixels: 132305 pixels are bad 0 pixels have cosmic rays 0 pixels are saturated 0 pixels are unfixable dt = 57.9 sec ----------------------------------------- Processing chip b - asR-b-43450003.apz ----------------------------------------- AP3DPROC Input Parameters: Saturation = 65000 Fixing Cosmic Rays Fixing Saturated Pixels Using UP-THE-RAMP Sampling Iterative CR detection OFF Output will be in ADU 1 File(s) input 1/1 Filename = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-b-43450003.apz ---------------------------------- /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-b-43450003.apz is a COMPRESSED file Decompressing with APUNZIP no_checksum: 0 Uncompressing >> /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-b-43450003.apz << (74.37 MB) Step I: Uncompress with funpack Nreads = 20 Step II: Reconstructing the original reads checking checksum 0 checking checksum 1 checking checksum 2 checking checksum 3 checking checksum 4 checking checksum 5 checking checksum 6 checking checksum 7 checking checksum 8 checking checksum 9 checking checksum 10 checking checksum 11 checking checksum 12 checking checksum 13 checking checksum 14 checking checksum 15 checking checksum 16 checking checksum 17 checking checksum 18 checking checksum 19 checking checksum 20 dt = 86.546773 sec Removing recently decompressed FITS file at end of processing Data file description: Datacube size = 2560 x 2048 x 20 Nreads = 20 Chip = b DET file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/detector/asDetector-b-22810006.fits BPM file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/bpm/asBPM-b-22620001.fits Dark Correction file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/darkcorr/asDark-b-22620001.fits Flat Field Correction file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/flatcorr/asFlat-b-22660002.fits Checking for bad reads in aprefcorr, indiv: 3 Calculating mean reference reading ref: 0 1 Rejecting: 0 28056.930 4.1442224 28074 reading ref: 1 2 reading ref: 2 3 reading ref: 3 4 reading ref: 4 5 reading ref: 5 6 reading ref: 6 7 reading ref: 7 8 reading ref: 8 9 reading ref: 9 10 reading ref: 10 11 reading ref: 11 12 reading ref: 12 13 reading ref: 13 14 reading ref: 14 15 reading ref: 15 16 reading ref: 16 17 reading ref: 17 18 reading ref: 18 19 reading ref: 19 20 Reference processing Ref processing: 1 nsat: 1 Ref processing: 2 nsat: 1 Ref processing: 3 nsat: 1 Ref processing: 4 nsat: 1 Ref processing: 5 nsat: 1 Ref processing: 6 nsat: 1 Ref processing: 7 nsat: 1 Ref processing: 8 nsat: 1 Ref processing: 9 nsat: 1 Ref processing: 10 nsat: 1 Ref processing: 11 nsat: 1 Ref processing: 12 nsat: 1 Ref processing: 13 nsat: 1 Ref processing: 14 nsat: 1 Ref processing: 15 nsat: 1 Ref processing: 16 nsat: 1 Ref processing: 17 nsat: 1 Ref processing: 18 nsat: 1 Ref processing: 19 nsat: 1 Ref processing: 20 nsat: 1 lastgood: 19 Read(s) 1 are bad. Processing the datacube 500/2048 1000/2048 1500/2048 2000/2048 subtracting reference array... Writing output to: /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/exposures/apogee-s/59907/as2D-b-43450003.fits Deleting recently decompressed file /scratch/general/nfs1/mwm//asR-b-43450003.fits BAD/CR/Saturated Pixels: 75358 pixels are bad 0 pixels have cosmic rays 0 pixels are saturated 0 pixels are unfixable dt = 114.4 sec ----------------------------------------- Processing chip c - asR-c-43450003.apz ----------------------------------------- AP3DPROC Input Parameters: Saturation = 65000 Fixing Cosmic Rays Fixing Saturated Pixels Using UP-THE-RAMP Sampling Iterative CR detection OFF Output will be in ADU 1 File(s) input 1/1 Filename = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-c-43450003.apz ---------------------------------- /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-c-43450003.apz is a COMPRESSED file Decompressing with APUNZIP no_checksum: 0 Uncompressing >> /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/data/apogee/lco/59907/asR-c-43450003.apz << (66.95 MB) Step I: Uncompress with funpack Nreads = 20 Step II: Reconstructing the original reads checking checksum 0 checking checksum 1 checking checksum 2 checking checksum 3 checking checksum 4 checking checksum 5 checking checksum 6 checking checksum 7 checking checksum 8 checking checksum 9 checking checksum 10 checking checksum 11 checking checksum 12 checking checksum 13 checking checksum 14 checking checksum 15 checking checksum 16 checking checksum 17 checking checksum 18 checking checksum 19 checking checksum 20 dt = 49.904981 sec Removing recently decompressed FITS file at end of processing Data file description: Datacube size = 2560 x 2048 x 20 Nreads = 20 Chip = c DET file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/detector/asDetector-c-22810006.fits BPM file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/bpm/asBPM-c-22620001.fits Dark Correction file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/darkcorr/asDark-c-22620001.fits Flat Field Correction file = /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/cal/apogee-s/flatcorr/asFlat-c-22660002.fits Checking for bad reads in aprefcorr, indiv: 3 Calculating mean reference reading ref: 0 1 Rejecting: 0 27214.986 2.8044357 27230 reading ref: 1 2 reading ref: 2 3 reading ref: 3 4 reading ref: 4 5 reading ref: 5 6 reading ref: 6 7 reading ref: 7 8 reading ref: 8 9 reading ref: 9 10 reading ref: 10 11 reading ref: 11 12 reading ref: 12 13 reading ref: 13 14 reading ref: 14 15 reading ref: 15 16 reading ref: 16 17 reading ref: 17 18 reading ref: 18 19 reading ref: 19 20 Reference processing Ref processing: 1 nsat: 1 Ref processing: 2 nsat: 1 Ref processing: 3 nsat: 1 Ref processing: 4 nsat: 1 Ref processing: 5 nsat: 1 Ref processing: 6 nsat: 1 Ref processing: 7 nsat: 1 Ref processing: 8 nsat: 1 Ref processing: 9 nsat: 1 Ref processing: 10 nsat: 1 Ref processing: 11 nsat: 1 Ref processing: 12 nsat: 1 Ref processing: 13 nsat: 1 Ref processing: 14 nsat: 1 Ref processing: 15 nsat: 1 Ref processing: 16 nsat: 1 Ref processing: 17 nsat: 1 Ref processing: 18 nsat: 1 Ref processing: 19 nsat: 1 Ref processing: 20 nsat: 1 lastgood: 19 Read(s) 1 are bad. Processing the datacube 500/2048 1000/2048 1500/2048 2000/2048 subtracting reference array... Writing output to: /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/mwm/apogee/spectro/redux/daily/exposures/apogee-s/59907/as2D-c-43450003.fits Deleting recently decompressed file /scratch/general/nfs1/mwm//asR-c-43450003.fits BAD/CR/Saturated Pixels: 83893 pixels are bad 0 pixels have cosmic rays 0 pixels are saturated 0 pixels are unfixable dt = 101.5 sec AP3D finished dt = 279.5 sec